vabase

PIK3CD L666P

c.1997T>CNM_005026.41-9721802-T-C
PI3K-AKT gain of function transition AlphaMissense: likely pathogenic LM

Reports 1 in LM

ISSVA entityAllele fractionSources
LM 2% (WES 5/289 reads); 3% (ddPCR 2/71 droplets)

Bars show the reported allele-fraction range on a 0 to 50 percent axis.

Position in PIK3CD 1 catalogued variant in this gene

PI3K-ABD (16–105)PI3K-ABDPI3K-RBD (187–278)PI3K-RBDC2 PI3K-type (319–476)C2 PI3K-typePIK helical (497–674)PIK helicalPI3K/PI4K catalytic (745–1027)PI3K/PI4K ca…11044 aaL666P

Pathway and targeted therapy

Variant in the PI3K-AKT pathway. Repurposed drugs already used in the clinic for this pathway: alpelisib (PI3Kα inhibitor), sirolimus (mTOR inhibitor).

Open and recent trials (4 in vascular / lymphatic anomalies for alpelisib)

Primary sources 1

  1. A somatic mutation in PIK3CD unravels a novel candidate gene for lymphatic malformation.
    Wang S, Wang W, Zhang X, Gui J, Zhang J, Guo Y, Liu Y, Han L, Liu Q, Li Y, Sun N, Liu Z, Du J, Tai J, Ni X. · Orphanet J Rare Dis · 2021

Mentioned in 1 publications indexed by Europe PMC.

Annotations refreshed 2026-10-09 from Europe PMC, ClinVar, ClinicalTrials.gov, gnomAD, and Genome Nexus. Coordinates handled per assembly (gnomAD GRCh38, Genome Nexus GRCh37).